[BioC] Problem with MAS5 calls on MoEx array

[Peter Saffrey]

cstrato wrote:
> The problem turned out to be a missing "#include <cstdlib>" in some 
> source files, which gcc-4.3.2 did accept, while gcc-4.4.1 is more 
> restrictive. Thus I have uploaded a new version "xps-1.6.3" to BioC, 
> which should solve the problem.
>

Yes, I tried the instructions you posted here:

https://stat.ethz.ch/pipermail/bioconductor/2009-August/029192.html

which essentially involving adding #include <cstdlib> in a few places, 
and this made the package compile.

I couldn't install your package with biocLite() because it kept hitting 
the old version. If I install it from the tgz, I get:

XPSPreProcessing.cxx:5821: error: call of overloaded 'abs(Int_t&)' is 
ambiguous

Adding the #include <cstdlib> line in XPSPreProcessing.cxx fixed the 
problem, though - it now compiles with g++-4.4.1-4.

Thanks,

Peter