[BioC] Combine two mapped files

Kasper Daniel Hansen khansen at stat.berkeley.edu
Fri Jan 8 18:09:59 CET 2010

If you give several filenames you read them in jointly, like

readAligned(pattern = "s_[56]_sequence.maq.map", type = "MAQMap")


On Jan 8, 2010, at 11:29 AM, Droit Arnaud wrote:

> Hello,
> I have two mapped files from Chip_seq experiments produced by maq software.
> I read this files with the readAligned function from the ShortRead package.
> I just want to combine this two files in one, I am wondering if anyone know the best method to do this.  I am trying to use rbind or cbind ?
> dataIP1<- readAligned(s_5_sequence.maq.map",type="MAQMap")
> dataIP2<- readAligned(s_6_sequence.maq.map",type="MAQMap")
> dataIP3<-...
> Thanks
> Arnaud.
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor

More information about the Bioconductor mailing list