[BioC] identifying network communities in a protein-protein interaction graph

Seth Falcon sfalcon at fhcrc.org
Tue Jan 19 21:33:29 CET 2010

On 1/18/10 9:10 AM, Coghlan, Avril wrote:
> I am wondering is there any function available in Bioconductor or other
> R libraries for detecting network communities in protein-protein
> interaction graphs (where a "network community" is defined as a part of
> a network that has more internal connections than to the rest of the
> network)?

You might find relevant packages using these listings:


In particular, perhaps ppiStats has something of interest to you.

+ seth

Seth Falcon
Bioconductor Core Team | FHCRC

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