[BioC] findOveraps suggestions
jayoung at fhcrc.org
Fri Jan 22 00:04:44 CET 2010
On Jan 21, 2010, at 1:49 PM, Michael Lawrence wrote:
> So, we could go ahead and add that option.
that would be great - thank you.
> Not sure "simplify" would be a good word. Or would we want two
> separate options, one to remove the obvious self hits and another to
> remove the redundant hits?
I think keeping the two options separate is probably better?
> Maybe 'ignoreSelf' and then "normalize" or something? Suggestions
good - I think ignoreSelf is very clear (and you're right, simplify
isn't so good). "normalize" makes me think of other things - maybe
not so good. "ignoreSymmetric" perhaps? (only makes sense if
query=subject - perhaps there could be a check for that if user tries
to invoke that option?)
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