[BioC] DESeq question correlation

[Naomi Altman]

This is easily done without DESeq.  E.g. you could use the cor 
function to compute correlations, and pairs to plot all pairs of samples.

--Naomi

At 06:42 PM 7/28/2010, Pete Shepard wrote:
>Hi All,
>
>I am wondering if the DESeq package for Bioconductor has a function to plot
>and calculate the Pearson correlation for biological replicates?
>
>TIA
>
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Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Dept. of Statistics                              814-863-7114 (fax)
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