[BioC] GEOquery problem

[David martin]

It looks to me that there might some problem with softfiles. Did anybody 
came across a similar problem ??


library(GEOquery)
gse <- getGEO(filename = 
system.file("extdata/GSE21630_family.soft.gz",package = "GEOquery"))

Error in read.table(con, sep = "\t", header = FALSE, nrows = nseries) :
   invalid 'nlines' argument
In addition: Warning messages:
1: In file(fname, "r") :
   file("") only supports open = "w+" and open = "w+b": using the former
2: In file(con, "r") :
   file("") only supports open = "w+" and open = "w+b": using the former
3: In file(fname, "r") :
   file("") only supports open = "w+" and open = "w+b": using the former