[BioC] How to make my own GO.db?

Marc Carlson mcarlson at fhcrc.org
Sat Jun 26 02:43:24 CEST 2010

Hi Rae,

Are you looking for the GO.db package?



On 06/25/2010 02:06 PM, Xiaohui Wu wrote:
> Hi all,
> There are some GO databases 'org.Hs.eg.db' available in Biocondutor, which can be used in some R packages like goProfiles. But I need to analyse the GO terms in Chlamy, and no corresponding GO db can be found. 
> Is there any document describing how to make GO db, I googled, but none was found. Or, is there any other way like using perl to relate the GO terms and genes and do some hypothesis tests between two groups of genes?
> Thanking you,
> Rae
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