[BioC] Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db'; RS-DBI driver -database locked

[Manikhandan Mudaliar]

Marc Carlson <mcarlson at ...> writes:

> 
> Hi Manikhandan,
> 
> I am unable to reproduce this problem.  Can you please give us your
> sessionInfo() as described in the posting guide? 
> 
> http://www.bioconductor.org/docs/postingGuide.html
> 
> I can tell you that none of the human chip packages will work without
> the org.Hs.eg.db package installed so getting this installed is going to
> be critical to your success. 
> 
>   Marc


Marc Carlson <mcarlson at ...> writes:

> 
> Hi Manikhandan,
> 
> I am unable to reproduce this problem.  Can you please give us your
> sessionInfo() as described in the posting guide? 
> 
> http://www.bioconductor.org/docs/postingGuide.html
> 
> I can tell you that none of the human chip packages will work without
> the org.Hs.eg.db package installed so getting this installed is going to
> be critical to your success. 
> 
>   Marc



Dear Marc,

Thanks very much.

My sessionInfo:

> sessionInfo()
R version 2.11.1 (2010-05-31)
x86_64-unknown-linux-gnu

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C             
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8   
 [5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8  
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                
 [9] LC_ADDRESS=C               LC_TELEPHONE=C           
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C      

attached base packages:
[1] splines   stats     graphics  grDevices utils     datasets  methods 
[8] base    

other attached packages:
 [1] e1071_1.5-24          class_7.3-2           samr_1.28           
 [4] impute_1.22.0         bridge_1.12.1         rama_1.22.1         
 [7] RankProd_2.20.0       AnnotationDbi_1.10.1  Biostrings_2.16.5   
[10] IRanges_1.6.6         preprocessCore_1.10.0 affyio_1.16.0       
[13] plgem_1.20.0          MASS_7.3-6            siggenes_1.22.0     
[16] multtest_2.4.0        simpleaffy_2.24.0     gcrma_2.20.0        
[19] genefilter_1.30.0     RColorBrewer_1.0-2    affydata_1.11.10    
[22] affy_1.26.1           Biobase_2.8.0       

loaded via a namespace (and not attached):
[1] annotate_1.26.0 DBI_0.2-5       RSQLite_0.9-1   survival_2.35-8
[5] tools_2.11.1    xtable_1.5-6  
>

Thanks.

Regards,
Mani