[BioC] Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db'; RS-DBI driver -database locked
drmani.vet at gmail.com
Tue Jun 29 22:24:48 CEST 2010
Marc Carlson <mcarlson at ...> writes:
> Hi Manikhandan,
> I still cannot reproduce this problem. I have loaded all the latest
> versions of the packages that you have in your sessionInfo() and none of
> them causes any problems for me. But the error says that your
> annotation database is locked. And so I wonder if you might have other
> R sessions (or other things) open which are tapping into (and possibly
> writing to) this same library? So you might want to start over, and be
> sure to try and kill any rogue R processes that may be present, it might
> also be a good idea to start fresh by moving the .RData file from the
> directory you use to launch R. Another thing to try is to remove your
> previous annotation packages (in particular org.Hs.eg.db since that one
> is giving this error) with remove.packages(). That way you can get a
> fresh start when you try to use biocLite() to install these packages.
Thanks for your time and efforts.
It is not working.
I have tried many times (rebooting, launching R from different directories,
starting new sessions, etc). I have no other R sessions running.
remove.packages("org.Hs.eg.db") reports that no such packages in my library.
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