[BioC] KEGGgraph fails on a KEGG XML file

Rajarshi Guha rajarshi.guha at gmail.com
Fri Mar 5 20:57:10 CET 2010


Hi, I'm using KEGGgraph on R 2.9.0 (64 bit) on OS X 10.5.7. When
trying to read in the KEGG XML for hsa00051, I get the following
message:

> parseKGML2Graph('hsa00051.xml', genesOnly=FALSE)
Error in UseMethod("xmlAttrs", node) :
  no applicable method for "xmlAttrs"


Has anybody seen this before?

-- 
Rajarshi Guha
NIH Chemical Genomics Center



More information about the Bioconductor mailing list