[BioC] reverse engineering package

Robert Castelo robert.castelo at upf.edu
Mon Mar 22 18:16:59 CET 2010


hi,

take a look to the G1DBN package which is not part of BioC but you'll
find it on the CRAN repository, concretely at:

http://cran.r-project.org/web/packages/G1DBN/index.html

its theoretical underpinning is partly based on qp-graphs just as the
the qpgraph package for steady-state data, you'll find the corresponding
article here:

http://www.bepress.com/sagmb/vol8/iss1/art9

you'll have, however, to contact directly the package maintainer for
questions related to this package.

cheers,

robert.
ps: somehow i got today this and other messages, that is, two weeks
later so, sorry for the delay in the answer.



On Mon, 2010-03-08 at 22:48 +0800, Weiwei Shi wrote:
> Hi there,
> 
> Are there other packages like minet or qpgraph in bioC but which analyze
> data in a time-dependent mode?
> 
> Thanks,
> 
> Weiwei
>



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