[BioC] "mogene10stv1cdf"

Marc Carlson mcarlson at fhcrc.org
Fri Mar 26 22:32:38 CET 2010


Hi Luqin,

There are presently two different revisions of that chip.  The 3rd
revision has a cdf on our website and can be found here:

http://www.bioconductor.org/packages/release/data/annotation/html/mogene10stv1.r3cdf.html

But in case that is not the version that you need, you can also simply
"make" a cdf package by going to the Affymetrix website, getting the cdf
file and then using James MacDonalds  makecdfenv package.  You can also
find information about that here:

http://www.bioconductor.org/packages/release/bioc/html/makecdfenv.html

And since you mentioned that you are a student, I recommend that you
used biocLite() to ensure the versions of the packages you get match
with your version of R.  You can learn more about that here:

http://www.bioconductor.org/docs/install/

Hope this helps,


  Marc



On 03/26/2010 10:05 AM, Luqin Deng wrote:
> Dear Dir or Madam,
>
> I am a first-year student at University of Alabama at Birmingham (UAB) and I am doing some homework which requires "mogene10stv1cdf" in R envoriment. I can not get it from Bioconductor and I could not find it on other websites, either. Would you please help me to find it? Thank you very much. 
>
>
> Sincerely,
> Luqin
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