[BioC] sir

[Heidi Dvinge]

Dear Deepak,

(cc'd to the bioconductor email list)

> sir,
>
> Iam a PhD student working in cancer biology. Recently i have done
> expression
> analysis of 48 gene using TLDA. for the analysis of that that data i have
> tried the R using
> HTqPCR<http://www.ebi.ac.uk/bertone/software/HTqPCR_1.1.4.zip>in R
> 2.11. but i give this
> source  ("http://bioconductor.org/biocLite.R")
>
>
>                        biocLite("HTqPCR")
>

Could you please provide the exact error you get when you try to use:

source("http://bioconductor.org/biocLite.R")
biocLite("HTqPCR")

I'm afraid that without knowing the error message I can't know what the
problem is. Also, please provide the output of:

sessionInfo()

so that we know what system + version you're on.

On a side note, when you use biocLite, HTqPCR actually gets installed
directly from the R repository, not from the URL you mention here
(http://www.ebi.ac.uk/bertone/software/), but using biocLite is always the
recommended way, since it will automatically get the package version
compatible with your R/BioC installation, and all the required
dependencies.

HTH
\Heidi

>  to install the package of HTqPCR
> <http://www.ebi.ac.uk/bertone/software/HTqPCR_1.1.4.zip> it shows that
> some error is their i tried with different R versions but iam not able
> to solve the problem. Could you please
> help me solve me the problem with the analysis of real time PCR using
> R with HTqPCR <http://www.ebi.ac.uk/bertone/software/HTqPCR_1.1.4.zip>.
>
>
> thanking you
>
> --
> Deepak Roshan V G
> PhD student
> Laboratory Of Cell Cycle Regulation  &   Molecular Oncology
> Division of Cancer Research
> Regional Cancer Centre
> Thiruvananthapuram
> Kerala, India 695 011
>