[BioC] anybody parsing BioPAX 2?

Paul Shannon pshannon at systemsbiology.org
Thu May 20 03:26:40 CEST 2010


I wish to parse pathways from NCI/Nature Pathway Interaction Database into graphNELs.  They are available as BioPAX, with an '.owl' file extension.

Has anybody already done this?  I have a start on the task using the XML package, but don't wish to replicate work already done.

Thanks!

 - Paul


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