[BioC] Need help in writing a function

Martin Morgan mtmorgan at fhcrc.org
Tue Nov 2 17:35:17 CET 2010


On 11/02/2010 09:22 AM, Pradeep Battula wrote:
> Hi,
> 
> Can anyone help me by providing hints in writing a function that takes a list of entrez gene identifiers as an input(e.g. differentially expressed genes in a gene expression study)  and a list of background genes (e.g. entrez gene identifiers of all probed genes on the microarray) and performs a hypergeometric test for over representation against GO and KEGG.
> 

Hi Pradee -- have you looked at the BiocViews

http://bioconductor.org/help/bioc-views/release/BiocViews.html

'Software' 'Annotation' packages?

Martin

> Regards,
> Pradee.
> 
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