[BioC] package help

Wolfgang Huber whuber at embl.de
Tue Oct 12 09:35:22 CEST 2010


You could have a look at Ringo.

See also: Analyzing ChIP-chip data using bioconductor.
Toedling J, Huber W.
PLoS Comput Biol. 2008 Nov;4(11):e1000227.
PMID: 19043

	Best, Wolfgang

Il Oct/12/10 12:23 AM, Adrian Johnson ha scritto:
> Hello group,
> what bioconductor packages do you suggest to use for nimblegen
> promoter tiling arrays (NimbleGen Oligonucleotide promoter tiling
> array (2005-03-31_MM5)
> ).  These chips were used on identifying methylated regions of genome
> using MeDIP method. Thank you.
> sincerely,
> Adrian
>
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