[BioC] How do I get ILMN_nnnn ids?

James Carman james at carmanconsulting.com
Fri Sep 17 17:25:47 CEST 2010


I've been following the "Analysing Illumina bead-based data using
beadarray" instructions.  Right now, I am doing (roughly) this:

library(beadarray)
BLData = readIllumina(useImages=FALSE,annoPkg='Humanv3')
BSData = createBeadSummaryData(BLData,imagesPerArray=1,method="illumina")

However, the ids or row names in the BSData object appear to be the
bead identifiers.  What I need is data for the ILMN_nnnn ids.  How do
I do that mapping?

BLData



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