[BioC] reading data from Beadarray into R

Steve Lianoglou mailinglist.honeypot at gmail.com
Wed Sep 29 23:57:17 CEST 2010

In addition to what Jenny mentioned, note:

On Wed, Sep 29, 2010 at 5:12 PM, Hajar Hassani Lahsinoui
<hajar.hassani at gmail.com> wrote:
> Still not working....
> getwd()
> [1] "/Users/hajarhassani/Desktop/Experiment"


>> targets <- read.table('/Users/hajarhassani/Desktop/experiment/beadTypeFile.txt')
> Error in file(file, "rt") : cannot open the connection
> In addition: Warning message:
> In file(file, "rt") :
>  cannot open file '/Users/hajarhassani/Desktop/experiment/beadTypeFile.txt': No such file or directory

You have "Experiment" in one, and "experiment" in the other.

I guess you're using OS X (?), which is not case sensitive by default,
but ... just pointing out that you need to be extra careful.

Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact

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