[BioC] convertion from SAM to BAM

Paul Geeleher paulgeeleher at gmail.com
Tue Apr 26 15:12:29 CEST 2011


Not sure if you can do it from within Bioconductor, but the command
line tool samtools will let you do it. If you really need to do it
from within R I suppose you could call samtools from R.

Paul.

On Tue, Apr 26, 2011 at 1:52 PM, João Moura <palerma at gmail.com> wrote:
> Hello,
>
> Do you know any way of convertin SAM to BAM using bioconductor?
>
> Thanks in advance,
>
> --
> João Moura
>
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>
>
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-- 
Paul Geeleher (PhD Student)
School of Mathematics, Statistics and Applied Mathematics
National University of Ireland
Galway
Ireland
--
www.bioinformaticstutorials.com



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