[BioC] Bug report.

[Yuan Hao]

Dear list,

I found "annotate::getAnnMap" seems not working for R-2.14.0.

What I have is KEGG pathway ids, and I would like to return the  
pathway names using the following scenario commands:

 > library(Category)
 > keggID<-"04940"
 > getPathNames(keggID)
Error: getAnnMap: package KEGG not available

Also, the same Error message showed up when I try to use the  
'summary()' function after "GOstats::hyperGTest". I would appreciate  
very much if it can be confirmed that this is a R/Bioconductor problem  
rather than a local one. Thank you very much in advance!


 > sessionInfo()
R version 2.14.0 Patched (2011-11-25 r57751)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)

locale:
[1] en_IE.UTF-8/en_IE.UTF-8/en_IE.UTF-8/C/en_IE.UTF-8/en_IE.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
  [1] annotate_1.32.0       org.Hs.eg.db_2.6.4    limma_3.10.0
  [4] affy_1.32.0           BiocInstaller_1.2.1   GOstats_2.20.0
  [7] RSQLite_0.11.1        DBI_0.2-5             graph_1.32.0
[10] Category_2.20.0       AnnotationDbi_1.16.10 Biobase_2.14.0

loaded via a namespace (and not attached):
  [1] affyio_1.22.0         genefilter_1.36.0     GO.db_2.6.1
  [4] GSEABase_1.16.0       IRanges_1.12.5        preprocessCore_1.16.0
  [7] RBGL_1.30.1           splines_2.14.0        survival_2.36-10
[10] tools_2.14.0          XML_3.6-2             xtable_1.6-0
[13] zlibbioc_1.0.0

Cheers,
Yuan