[BioC] can't downlaod package "beadarrayExampleData"

Dan Tenenbaum dtenenba at fhcrc.org
Mon Dec 26 09:19:40 CET 2011


On Sun, Dec 25, 2011 at 9:39 PM, 易士 路 <math_servant at hotmail.com> wrote:
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> hi, I try to download package "beadarrayExampleData" using windows R.
> But something is wrong. > biocLite(c("beadarrayExampleData", "beadarrayExampleData"))
> BioC_mirror: 'http://www.bioconductor.org'
> Using R version 2.14, BiocInstaller version 1.2.1.
> Installing package(s) 'beadarrayExampleData' 'beadarrayExampleData'
> Installing package(s) into 'C:/Users/A00460/Documents/R/win-library/2.14'
> (as 'lib' is unspecified)
> 試開URL 'http://www.bioconductor.org/packages/2.9/data/experiment/bin/windows/contrib/2.14/beadarrayExampleData_1.0.3.zip'
> Content type 'application/zip' length 31355200 bytes (29.9 Mb)
> 開啟了 URL
> downloaded 10.7 Mb錯誤在read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) :
>  無法開啟連結
> 此外: Warning messages:
> 1: In download.file(url, destfile, method, mode = "wb", ...) :
>  下載的長度 11185933 != 報告的長度 31355200
> 2: In unzip(zipname, exdir = dest) : 從 zip 檔案中解開 1 時發生錯誤
> 3: In read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) :
>  cannot open compressed file 'beadarrayExampleData/DESCRIPTION', probable reason 'No such file or directory' Is the file unavailable now?
> Thanks in advance. Louis

I was able to install this package using the same command, on R 2.14
on Windows, It sounds like maybe your download was interrupted? If you
try again in a fresh R session, do you get the same result?
If you are still having a problem, please post the output of sessionInfo().
Dan


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