[BioC] parse HomoloGene XML data file

[Hans-Rudolf Hotz]

On 02/16/2011 04:54 PM, dong he wrote:
> Hi,
>
> Does anybody know which package can be used to parse NCBI HomoloGene XML
> data file to get orthologs?
>

Hi Dong

If you are just interested in getting the orthologs, it is probably 
sufficient to look at the 'homologene.data' file, which is a simple tab 
delimited file:

ftp://ftp.ncbi.nih.gov/pub/HomoloGene/current/homologene.data


Regards, Hans


> thanks!
>
> Dong
>
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>
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