[BioC] fastq files

David martin vilanew at gmail.com
Fri Mar 11 14:42:56 CET 2011


Hi,
I have the following fastq header:

@ILLUMINA-E6F4B9_0000:5:1:1184:949#0/1
NGGGCTGGGTCGGTCGGGC
+ILLUMINA-E6F4B9_0000:5:1:1184:949#0/1
BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB

Does any of the R packages (e.g: shortread) can convert this fastq to 
fasta file ?

thanks,
david



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