[BioC] EdgeR - Roast/Romer-like for digital gene expression

[Jeff Hsu]

I am looking to test if a list of genes is significantly enriched in
the differentially expressed dataset. I was wondering if there was a
similar function to roast (Wu, et. al 2010) found in limma for digital
gene expression data such as RNA-sequencing data.  I am limited by the
sample size and experimental design (4 samples from 2 tissues).


Jeff Hsu
Graduate Student in Molecular Medicine at Case Western Reserve University