[BioC] Gene description

James W. MacDonald jmacdon at med.umich.edu
Wed Mar 30 20:13:53 CEST 2011


Hi Mohamed,

On 3/30/2011 11:41 AM, Mohamed Lajnef wrote:
> Dear All,
> I'm looking to make a summary of the functionality of a gene
> (ID,name,position,Ch,function,pathways).
> could you please give me some useful informations (packages) to do this
> summary ?

You don't mention the species you are interested in, so assuming Homo 
sapiens, you want the org.Hs.eg.db package. For more information, see 
the AnnotationDbi vignette here

http://www.bioconductor.org/packages/2.7/bioc/vignettes/AnnotationDbi/inst/doc/AnnotationDbi.pdf

Best,

Jim


>
> Any help would be appreciated
>
> Regrads
>
>
>
>
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-- 
James W. MacDonald, M.S.
Biostatistician
Douglas Lab
University of Michigan
Department of Human Genetics
5912 Buhl
1241 E. Catherine St.
Ann Arbor MI 48109-5618
734-615-7826
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