[BioC] Agilent Mouse annotation and using methods of AnnotationDbi

Marc Carlson mcarlson at fhcrc.org
Tue May 31 19:48:00 CEST 2011


Hi John,

Maybe you wanted to do something like this?:

head(toTable(mgug4120aCHR))


If this doesn't answer your question can you pleae be a bit more 
specific about what you want?  It's pretty hard to know (from this end) 
if you don't spell it out for us pretty explicitly.


   Marc



On 05/31/2011 03:52 AM, john herbert wrote:
> Dear bioconductors,
> I would like produce a table of agilent array annotation from the following
> db package;
> ls("package:mgug4120a.db")
>
> I was wondering if there is a way to dump all probes and a selected set of
> annotation for the probes. Probes that are missing annotation are still
> reported but with no annotation.
>
>
> Thank you for any help on this.
>
> 	[[alternative HTML version deleted]]
>
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