[BioC] error with MEDIPS.CpGenrich when using extend

Joern Dietrich dietrich.joern at gmail.com
Fri Oct 21 15:23:10 CEST 2011


Dear Elisabetta,

it seems that sum() doesn't automatically coerce so in this case we had to adapt
the MEDIPS.CPGenrich (MEDIPS 1.3.3) function which should be available within
the next days in the dev. In the meanwhile you could try to change sum(width(y))
as sum(as.numeric(width(y))) in your local version
".../MEDIPS/R/MEDIPS.CPGenrich.R".

If you have any further problems don't hesitate to contact us.
Best wishes,
Joern



More information about the Bioconductor mailing list