[BioC] SeattleIntro2011

YIfang Tan [guest] guest at bioconductor.org
Wed Apr 4 18:03:10 CEST 2012


Hi Martin!

I was trying to install package "SeattleIntro2011" but never succeed and got the warning message "package SeattleIntro2011 is not available for R version 2.15.0".  Also I tried Bioconductor to get the source code, no luck either.
I was wondering where I can get more information about this package, as it is very good starter kit for NGS analysis. 

However, SeattleIntro2011Data can be installed without any problem. Could you please give me any clue

Thanks a lot!

Yifang


 -- output of sessionInfo(): 

> sessionInfo()
R version 2.15.0 (2012-03-30)
Platform: x86_64-pc-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_CA.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_CA.UTF-8        LC_COLLATE=en_CA.UTF-8    
 [5] LC_MONETARY=en_CA.UTF-8    LC_MESSAGES=en_CA.UTF-8   
 [7] LC_PAPER=C                 LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_CA.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] Biostrings_2.24.0          BiocInstaller_1.4.3       
 [3] lattice_0.20-6             SeattleIntro2011Data_0.0.3
 [5] edgeR_2.6.0                limma_3.12.0              
 [7] GenomicFeatures_1.8.0      AnnotationDbi_1.18.0      
 [9] Biobase_2.16.0             GenomicRanges_1.8.2       
[11] IRanges_1.14.2             BiocGenerics_0.2.0        

loaded via a namespace (and not attached):
 [1] biomaRt_2.12.0     bitops_1.0-4.1     BSgenome_1.24.0    DBI_0.2-5         
 [5] grid_2.15.0        RCurl_1.91-1       Rsamtools_1.8.0    RSQLite_0.11.1    
 [9] rtracklayer_1.16.0 stats4_2.15.0      tools_2.15.0       XML_3.9-4         
[13] zlibbioc_1.2.0    
> 




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