[BioC] ChipPeakAnno: 4-way venn diagram

[Zhu, Lihua (Julie)]

Wolfgang,

Looks really cool! 

It seems that drawVennDiagram in gplot only supports venn diagram up to 5
sets. ChIPpeakAnno::makeVennDiagram first finds the overlaps among datasets,
then creates venn counts followed by calling the drawVennDiagram in gplot.
Should we get the gplot developer to implement the 6-way venn diagram?
Thanks!

Best regards,

Julie


On 8/9/12 12:11 PM, "Wolfgang Huber" <whuber at embl.de> wrote:

> 
> Can we have banana-shaped 6-way Venn diagrams? Like here:
> http://www.nature.com/nature/journal/v488/n7410/full/nature11241.html#/f4
> 
> Best wishes
> Wolfgang
> 
> Aug/8/12 7:00 PM, Zhu, Lihua (Julie) scripsit::
>> Jose,
>> 
>> The released version ChIPpeakAnno 2.4.0 in Bioconductor 2.10 supports 4-way
>> venn diagram (
>> http://www.bioconductor.org/packages/release/bioc/html/ChIPpeakAnno.html)
>> 
>>      source("http://bioconductor.org/biocLite.R")
>>      biocLite("ChIPpeakAnno")
>> 
>> Please let me know if this works for you. Thanks!
>> 
>> Best regards,
>> 
>> Julie
>> 
>> On 8/8/12 12:36 PM, "José LÓPEZ" <jose.lopez at umh.es> wrote:
>> 
>>> Dear Julie,
>>> 
>>> Although makeVennDiagram currently (v2.10) supports up to 3-way venn
>>> diagram
>>> (https://stat.ethz.ch/pipermail/bioconductor/attachments/20110502/9d4a25c5/a
>>> tt
>>> achment.pl
>>> ), I knew that you extended the function to 4-way in the dev version
>>> (v2.2.0).
>>> I need to make a 4-way venn diagram, so I would like to know whether
>>> it might be possible to install the dev version to try it.
>>> 
>>> Thank you in advance for your time and help,
>>> Kind regards,
>>> 
>>> Jose
>>> 
>>> 
>>> [[alternative HTML version deleted]]
>>> 
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>> 
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>