[BioC] modules incompatible with R 2.15.1
marcus.moeller at gmx.ch
Thu Aug 30 10:37:47 CEST 2012
> we have noticed that the following modules from the bioc archive are
> no longer compatible with R version 2.15.1:
> I would like to ask what is the official way to get them updated? Do
> I have to contact the authors directly or is there something like a
> Bugzilla available?
> Hi, Marcus.
> You can look here for build reports:
> And here for software releases:
> It looks at first glance like all the bioconductor packages except
> GlobalAncova are building fine right now and are available. GeneR is a
> special case since it is not a bioconductor package.
> Could you let us know what you mean by "no longer compatible with R
> version 2.15.1"? What did you try to do that suggested that was the
> case? Be sure to include the code you are trying and the output of
I have re-checked was able to build most of the packages now, but
hgu133a and GeneR where I got an error message like:
package ‘hgu133a’ is not available (for R version 2.15.1)
when trying to install it using:
/usr/bin/R --no-save --no-restore
Maybe hgu133a has been removed from the repository? Concerning GeneR, I
am sure that I have installed it from the bioc repository in the past.
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