[BioC] Highly Expressed Genes among DE genes in edgeR

Fatemehsadat Seyednasrollah fatsey at utu.fi
Wed Dec 12 14:22:25 CET 2012


Hi,

For an RNA-seq data, I have found the significant DE genes based on FDR < 0.05 using the exactTest() function.
Now I need to rank these DE genes based on the expression level (count values). What is the correct way of doing it?

Thank you in advance.



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