[BioC] Installing bioconductor with openSUSE 11.4 and R 2.14

[Bartlett, Thomas]

Hi,

Thanks for your previous replies about problems I've been having installing Bioconductor when using OpenSUSE 11.4 and R 2.14 I've solved the problem about the C compiler, which has now installed fine. However, I get the following error messages now: 

* installing *source* package ‘RSQLite’ ...
** package ‘RSQLite’ successfully unpacked and MD5 sums checked
/usr/lib64/R/bin/config: line 142: make: command not found
/usr/lib64/R/bin/config: line 143: make: command not found
/usr/lib64/R/bin/config: line 219: make: command not found
/usr/lib64/R/bin/config: line 142: make: command not found
/usr/lib64/R/bin/config: line 143: make: command not found
/usr/lib64/R/bin/config: line 219: make: command not found
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking for library containing fdatasync... none required
configure: creating ./config.status
config.status: creating src/Makevars
** libs
sh: make: command not found
ERROR: compilation failed for package ‘RSQLite’
* removing ‘/usr/lib64/R/library/RSQLite’
* installing *source* package ‘Biobase’ ...
** libs
sh: make: command not found
ERROR: compilation failed for package ‘Biobase’
* removing ‘/usr/lib64/R/library/Biobase’
* installing *source* package ‘IRanges’ ...
** libs
sh: make: command not found
ERROR: compilation failed for package ‘IRanges’
* removing ‘/usr/lib64/R/library/IRanges’
ERROR: dependencies ‘Biobase’, ‘RSQLite’, ‘IRanges’ are not available for package ‘AnnotationDbi’
* removing ‘/usr/lib64/R/library/AnnotationDbi’


any help would be very much appreciated!

Tom Bartlett