[BioC] Coordinate Question for Rgraphviz

[Jiayi Hou [guest]]

Hi,

I am trying to generate bubble plot using Rgraphviz package to show fold changes of genes between two samples. In order to make things clear, I need show values of fold changes for each of the gene I am plotting. Therefore, adding x-axis and y-axis would be truly helpful to visualize. Does anyone knows if it is possible to do so and if yes, then how to do it?

Thanks,

Jiayi

 -- output of sessionInfo(): 

R version 2.12.2 (2011-02-25)
Platform: i386-pc-mingw32/i386 (32-bit)

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] Rgraphviz_1.28.0 graph_1.28.0    

loaded via a namespace (and not attached):
[1] tools_2.12.2


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