[BioC] what is the default parameters of estimateDispersions in the DESeq

wang peter wng.peter at gmail.com
Wed Jul 11 16:38:04 CEST 2012


hello all
i donot know what is the default parameters of method,sharingMode,fitType


estimateDispersions(object, method = c("pooled", "per-condition",
        "blind"), sharingMode = c("maximum", "fit-only", "gene-est-only"),
        fitType = c("parametric", "local"), locfit_extra_args = list(),
        lp_extra_args = list(), modelFrame = NULL, modelFormula = count ~
            condition, ...)

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shan gao
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