[BioC] what is the default parameters of estimateDispersions in the DESeq

wang peter wng.peter at gmail.com
Wed Jul 11 16:53:31 CEST 2012


thank you very much
if i want to compare two experimental conditions
i should use

cds <- estimateVarianceFunctions(cds,method = "per-condition")

but the manual of DESeq never metion it, it will make users confusion


-- 
shan gao
Room 231(Dr.Fei lab)
Boyce Thompson Institute
Cornell University
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