[BioC] Library not loaded: /usr/local/lib/libgvc.5.dylib (Rgraphviz)

Peng Yu pengyu.ut at gmail.com
Wed Jul 18 03:39:48 CEST 2012


>> ~$ ll -go /usr/local/lib/libgvc.6.dylib
>> -rwxrwxr-x 1 988980 2012-05-21 00:21:09 /usr/local/lib/libgvc.6.dylib

Obviously, I have graphviz installed. Otherwise, I would not have the
above file. The problem is that my installation is newer (see version
below).

~$ dot -v
dot - graphviz version 2.29.20120702.0446 (20120702.0446)
libdir = "/opt/local/lib/graphviz"
Activated plugin library: libgvplugin_pango.6.dylib
Using textlayout: textlayout:cairo
Activated plugin library: libgvplugin_dot_layout.6.dylib
Using layout: dot:dot_layout
Activated plugin library: libgvplugin_core.6.dylib
Using render: dot:core
Using device: dot:dot:core
The plugin configuration file:
	/opt/local/lib/graphviz/config6
		was successfully loaded.
    render	:  cairo dot eps fig gd lasi map pic pov ps quartz svg tk
vml vrml xdot
    layout	:  circo dot fdp neato nop nop1 nop2 osage patchwork sfdp twopi
    textlayout	:  textlayout
    device	:  bmp canon cgimage cmap cmapx cmapx_np dot eps exr fig gd
gd2 gif gv imap imap_np ismap jp2 jpe jpeg jpg pct pdf pic pict plain
plain-ext png pov ps ps2 psd sgi svg svgz tga tif tiff tk vml vmlz
vrml wbmp webp x11 xdot xlib
    loadimage	:  (lib) bmp eps gd gd2 gif jpe jpeg jpg pdf png ps svg webp xbm


> It says that you need to install graphviz first, preferably version
> 2.26.3, from here if you are running Snow Leopard or newer:

> http://www.graphviz.org/pub/graphviz/stable/macos/snowleopard/graphviz-2.26.3.pkg

Is there a maintainer who can build Rgraphviz for the latest graphviz?

-- 
Regards,
Peng



More information about the Bioconductor mailing list