[BioC] Installation of XCMS / mzR failed

Johannes Raffler johannes.raffler at helmholtz-muenchen.de
Mon Jul 30 22:09:27 CEST 2012


>>
>> That is your hint ^^^^^^^^^^^^^^^^^^^
>>
>> You need to have the netcdf headers available and in your path. Looking at
>> the dependencies for xcms and then following the links to ncdf brought me to
>> this page:
>>
>> http://cran.fhcrc.org/web/packages/ncdf/INSTALL
>>
>> Which may be helpful.
>>
> Installing netcdf with apt-get *should* do the right thing:
>
> sudo apt-get install netcdf libnetcdf-dev
>

Thank you very much, Dan and Jim! It works fine now.

Johannes

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