[BioC] XPS package working with Affymetrix GeneChip 1.0 ST at gene level

Benilton Carvalho beniltoncarvalho at gmail.com
Sat Jun 2 12:19:52 CEST 2012


Another alternative, given that the affy package is not designed for
this, is the oligo package.... b

On 2 June 2012 02:02, Jorge Miró [guest] <guest at bioconductor.org> wrote:
>
> I was wondering if there is some way of getting the XPS package working at gene level as I need to get the gene expression from some Rat Gene chips (RaGene 1.0 ST r4)that I will analyze.
>
> I tried to use the Affy package before but as far as I understand they need .CDF file to get working and I only have CLF and PBG files for my chips.
>
> Kind regards
> Jorge
>
>  -- output of sessionInfo():
>
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