[BioC] Minfi error

Pooja [guest] guest at bioconductor.org
Mon Nov 5 23:04:30 CET 2012


Hi all, 

I have been working with minfi and am trying to use the code for dmp finder. I am through with all the steps till now, but I am stuck at the following, for which I request your help.

###################################################
### code chunk number 23: dmpFinder-categorical
###################################################
table(pd$Sample_Group)
M <- getM(mset, type = "beta", betaThreshold = 0.001)

On doing the above, I get the following error:

Error in getM(mset, type = "beta", betaThreshold = 0.001) : 
  unused argument(s) (betaThreshold = 0.001)

Can anyone help me know what am i missing? And how do I get through with this? 

Thanks in advance. 

 -- output of sessionInfo(): 

Error in getM(mset, type = "beta", betaThreshold = 0.001) : 
  unused argument(s) (betaThreshold = 0.001)

--
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