[BioC] Regarding CDF & annotation package

Hooiveld, Guido Guido.Hooiveld at wur.nl
Mon Oct 22 09:11:53 CEST 2012


Hi,
You can find annotation packages for both array types at the annotation page of BioC:
http://www.bioconductor.org/packages/release/BiocViews.html#___AnnotationData

Look for "hgu133a.db" (Affymetrix Human Genome U133 Set annotation data (chip hgu133a)) and "nugohs1a520180.db" (Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180)).

Regards,
Guido

--------------------------------------------------------- 
Guido Hooiveld, PhD 
Nutrition, Metabolism & Genomics Group 
Division of Human Nutrition 
Wageningen University 
Biotechnion, Bomenweg 2 
NL-6703 HD Wageningen 
the Netherlands 
tel: (+)31 317 485788 
fax: (+)31 317 483342 
email:      guido.hooiveld at wur.nl
internet:   http://nutrigene.4t.com 
http://scholar.google.com/citations?user=qFHaMnoAAAAJ
http://www.researcherid.com/rid/F-4912-2010


-----Original Message-----
From: bioconductor-bounces at r-project.org [mailto:bioconductor-bounces at r-project.org] On Behalf Of Gnanakkumaar P
Sent: Saturday, October 20, 2012 08:26
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] Regarding CDF & annotation package

Dear Sir/Madam,

I am using affylmgui package for microarray data analysis

I am using following two chip set data. I am very thankful if you could help with annotation package.

GPL96 [HG-U133A] Affymetrix Human Genome U133A Array

GPL7020_NuGO_Hs1a520180

Thank you very much..

--
With Regards,

P.Gnanakkumaar

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