[BioC] Convert Affy SNP array 0, 1, 2 to A C G T

Fabrice Tourre fabrice.ciup at gmail.com
Sun Oct 28 04:49:54 CET 2012

The data is produced by apt-probeset-genotype.

The default format of apt-probeset-genotype output is 0,1, 2, and -1.
I want to convert that output genotype calls in format ACTG and
referred to the forward genome strand.


On Sat, Oct 27, 2012 at 6:22 PM, Fabrice Tourre <fabrice.ciup at gmail.com> wrote:
> Dear list,
> Is there some bioconductor tools to convert Affy SNP array genotype 0,
> 1, 2 to A C G T?
> Thank you

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