[BioC] a question about trimLRPatterns?

Steve Lianoglou mailinglist.honeypot at gmail.com
Tue Oct 30 21:09:45 CET 2012


On Tue, Oct 30, 2012 at 3:20 PM, wang peter <wng.peter at gmail.com> wrote:
> yeah
> i see
> but for other case
>  Rpattern =              "NNNN"
> trimLRPatterns CANNOT  DO IT

Note that the title of the help page for `?trimLRpatterns` says: "Trim
Flanking Patterns from Sequences"

The NNNN pattern you are trying to "trim" is about as about as far
away from the definition of "flanking" as one can get ...


Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact

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