[BioC] a question about trimLRPatterns?
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Tue Oct 30 21:09:45 CET 2012
On Tue, Oct 30, 2012 at 3:20 PM, wang peter <wng.peter at gmail.com> wrote:
> i see
> but for other case
> subject = "TATAGTAGATATTGGAATNNNNGCACCATCAATAGATCGGAA"
> Rpattern = "NNNN"
> trimLRPatterns CANNOT DO IT
Note that the title of the help page for `?trimLRpatterns` says: "Trim
Flanking Patterns from Sequences"
The NNNN pattern you are trying to "trim" is about as about as far
away from the definition of "flanking" as one can get ...
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
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