[BioC] NAs as result for enrichPathway

dd [guest] guest at bioconductor.org
Thu Aug 22 00:10:08 CEST 2013


I am getting no results with these 316 Entrez Gene IDs for arabidopsis...

 -- output of sessionInfo(): 

> g<-read.csv("tair_ids to gene_ids.csv",header=TRUE)

> h<-as.character(g[,2])

> head(h)
[1] "839235" "838362" "838961" "837091" "837455" "837543"

> i<-enrichPathway(h, pvalueCutoff = 0.05,qvalueCutoff = 0.05)

> summary(i)
   Mode    NA's 
logical       1 

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