[BioC] import only partial samples of an array

Chris [guest] guest at bioconductor.org
Wed Aug 28 15:47:32 CEST 2013

Hi, I was wondering whether it was possible to only import the first few samples of an array using the lumiR or lumiR.batch function.

 -- output of sessionInfo(): 

> sessionInfo()
R version 3.0.1 (2013-05-16)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] parallel  stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] lumi_2.12.0        Biobase_2.20.1     BiocGenerics_0.6.0

loaded via a namespace (and not attached):
 [1] affy_1.38.1           affyio_1.28.0         annotate_1.38.0       AnnotationDbi_1.22.6  beanplot_1.1          BiocInstaller_1.10.3  Biostrings_2.28.0     colorspace_1.2-2     
 [9] DBI_0.2-7             GenomicRanges_1.12.5  grid_3.0.1            illuminaio_0.2.0      IRanges_1.18.3        KernSmooth_2.23-10    lattice_0.20-15       limma_3.16.7         
[17] MASS_7.3-26           Matrix_1.0-12         matrixStats_0.8.5     mclust_4.2            methylumi_2.6.1       mgcv_1.7-22           minfi_1.6.0           multtest_2.16.0      
[25] nleqslv_2.0           nlme_3.1-109          nor1mix_1.1-4         preprocessCore_1.22.0 R.methodsS3_1.4.4     RColorBrewer_1.0-5    reshape_0.8.4         RSQLite_0.11.4       
[33] siggenes_1.34.0       splines_3.0.1         stats4_3.0.1          survival_2.37-4       XML_3.95-0.2          xtable_1.7-1          zlibbioc_1.6.0

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