[BioC] annotation for Agilent Mouse an d Human 8x60K array

Marc Carlson mcarlson at fhcrc.org
Tue Feb 5 19:48:23 CET 2013


Hi Marco,

I assume you have looked here:

http://www.bioconductor.org/packages/release/BiocViews.html#___AnnotationData

But even though you have not told us much about what you want to do.  I 
suspect that in your case, your platform of interest might not actually 
be there yet.  Also there are two versions of the 8x60K platform (for 
human alone).  Which design were you looking for?  Anyways, once you 
have that information in hand, you probably need to go to Agilent and 
grab the relevant files so that you can follow the instructions in this 
vignette here to generate a package:

http://www.bioconductor.org/packages/2.11/bioc/vignettes/AnnotationForge/inst/doc/SQLForge.pdf


Please let me know if you have any trouble,


   Marc



On 02/05/2013 03:14 AM, Marco Fabbri wrote:
> Dear All,
>     I am looking for annotation for Agilent Mouse an d Human 8x60K array.
>
> thank you
>
> marco
>
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