[BioC] Bumphunter output

[Kasper Daniel Hansen]

You need to do permutation testing, by setting B=some number.

Kasper

On Mon, Feb 18, 2013 at 9:48 AM, khadeeja ismail <hajjja at yahoo.com> wrote:
> Hi All,
> I have a question about the output from the bumphunter package. Can I take all the regions in $tab as significant bumps or is there any other cut-off that I need to apply?
> Thanking you in advance,
> Khadeeja
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