[BioC] Problem in KEGGSOAP package

Asta Laiho asta.laiho at btk.fi
Tue Jan 8 13:27:00 CET 2013


Hi,

There seems to be some problem in the KEGGSOAP package:

> library(KEGGSOAP)
failed to load HTTP resource
Error : .onLoad failed in loadNamespace() for 'KEGGSOAP', details:
  call: NULL
  error: 1: failed to load HTTP resource

Error: package/namespace load failed for ‘KEGGSOAP’

I wonder if this is related to the general discontinuation of the KEGG support announced last year?

Are there any plans to come up with a similar REACTOMESOAP package supporting Reactome database instead?

Greetings, 
Asta

sessionInfo()
R version 2.15.1 (2012-06-22)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)

locale:
[1] C/UTF-8/C/C/C/C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] BiocInstaller_1.8.3 BiocGenerics_0.4.0 

loaded via a namespace (and not attached):
[1] RCurl_1.95-3    SSOAP_0.8-0     XML_3.95-0.1    XMLSchema_0.7-2
[5] codetools_0.2-8 tools_2.15.1   



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