[BioC] Pasilla data for "Counting with summarizeOverlaps/GenomicRanges"

Hervé Pagès hpages at fhcrc.org
Mon Jan 14 20:14:10 CET 2013


On 01/11/2013 10:16 AM, Tim Triche, Jr. wrote:
> On Fri, Jan 11, 2013 at 9:13 AM, Martin Morgan <mtmorgan at fhcrc.org> wrote:
>
>> and Rsamtools::asBam
>>
>
> which is an awesomely simple and effective function, since it handles a
> bunch of annoying SAM/BAM-related impedimentia by default!
>
> anyone who stumbles on a SAM file at some point will be happy to make its
> acquaintance
> thank you Herve and Martin

Well, Martin in that case. Like 95% of the Rsamtools package. So
thanks Martin!  :-) H.


> for anticipating everyone else's common case :-)
>
>

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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