[BioC] shortread error?

Wang Peter wng.peter at gmail.com
Thu Jan 24 04:55:51 CET 2013


i am running a pipeline to clean the reads

there was an error
Error in add(raw()) : record does not start with '@'
Calls: trimRead -> yield -> yield -> <Anonymous> -> add -> .Call
Execution halted

i never met it before,i think that is maybe due to data problem?
one fastq record start without  '@'
-- 
shan gao
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Boyce Thompson Institute for Plant Research
Cornell University
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