[BioC] get pixel coordinates interactively with EBimage

Andrzej Oleś andrzej.oles at gmail.com
Thu Jan 24 19:02:33 CET 2013


Dear Arnaud,

many thanks for your inquiry! Unfortunately, for now EBImage is not
capable of returning pixel coordinates interactively, as you would
like to. However, we are aware of this shortcoming and we hope to come
up with a solution to this in future releases.

Nevertheless, I would strongly encourage you to upgrade to the current
version of EBImage (4.0.0). It includes numerous improvements and
bugfixes, does not rely on ImageMagick anymore, and introduces a new
JavaScript image viewer in place of the old GTK-based one.

Kind regards,

Andrzej Oles
EBImage Development Team


On Mon, Jan 21, 2013 at 5:46 PM, Arnaud Duranel
<arnaud.duranel.09 at ucl.ac.uk> wrote:
> Hello
> I am using R 2.13.0 & EBImage 3.8.0.
> I am looking for a way to obtain a pixel coordinates (as an R object) by
> clicking interactively on an image displayed in the GTK window using the
> EBImage display() function.
> I could use locator() after having converted the image to grayscale and
> displayed it using image(), but as far as I am aware I would not be able to
> zoom in and out and move the picture around interactively.
> Many thanks for your help.
> A. Duranel, UCL Department of Geography
>
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